STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN21564.1Transcriptional regulator, LytTR family. (148 aa)    
Predicted Functional Partners:
SDN21529.1
Protein of unknown function.
 
     0.934
SDN63657.1
Two-component system, sensor histidine kinase YesM.
  
 0.809
SDN21633.1
TPR repeat.
    
  0.489
SDN21602.1
Competence protein ComFB.
       0.466
SDM59590.1
Histidine kinase.
  
 
 0.462
SDM80953.1
Two-component system, sensor histidine kinase YesM.
  
 
 0.462
SDN33902.1
Hypothetical protein.
  
 
 0.462
SDO06318.1
Sensor histidine kinase YesM.
  
 
 0.462
proA
Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
    
   0.461
SDN25785.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
    0.412
Your Current Organism:
Acetanaerobacterium elongatum
NCBI taxonomy Id: 258515
Other names: A. elongatum, AS 1.5012, Acetanaerobacterium elongatum Chen and Dong 2004, JCM 12359, strain Z7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.