STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN28325.1Membrane protein involved in the export of O-antigen and teichoic acid. (467 aa)    
Predicted Functional Partners:
SDN16131.1
UDPglucose 6-dehydrogenase.
  
  
 0.928
SDN25785.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.809
SDN28282.1
Ribosomal protein S18 acetylase RimI.
       0.773
SDM59264.1
UDP-N-acetyl-D-glucosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.557
SDM84488.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
  
 0.521
SDN01328.1
O-antigen biosynthesis protein WbqP.
  
  
 0.521
SDN84805.1
Orotate phosphoribosyltransferase.
 
     0.495
SDM84624.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
 0.486
SDN47793.1
Mannose-1-phosphate guanylyltransferase / phosphomannomutase.
  
  
 0.486
SDN28353.1
Dipeptidase D.
       0.476
Your Current Organism:
Acetanaerobacterium elongatum
NCBI taxonomy Id: 258515
Other names: A. elongatum, AS 1.5012, Acetanaerobacterium elongatum Chen and Dong 2004, JCM 12359, strain Z7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.