STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN30123.1Hypothetical protein. (368 aa)    
Predicted Functional Partners:
SDN27508.1
Sporulation integral membrane protein YlbJ.
  
     0.619
SDM53467.1
LysM domain-containing protein.
  
     0.615
SDN35852.1
Stage III sporulation protein AH.
  
     0.598
SDN36661.1
Sporulation protein YunB.
  
     0.593
SDN35896.1
Stage III sporulation protein AG.
  
     0.562
SDN27609.1
Similar to stage IV sporulation protein.
  
     0.556
SDN35980.1
Stage III sporulation protein AE.
  
     0.548
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
     
 0.529
SDN30041.1
Hypothetical protein.
       0.441
dinB
DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
       0.441
Your Current Organism:
Acetanaerobacterium elongatum
NCBI taxonomy Id: 258515
Other names: A. elongatum, AS 1.5012, Acetanaerobacterium elongatum Chen and Dong 2004, JCM 12359, strain Z7
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.