STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN30420.1Rubrerythrin. (101 aa)    
Predicted Functional Partners:
SDN30341.1
Rubredoxin.
  
  
 0.870
SDN30380.1
Rubrerythrin.
  
  
 0.716
SDN21038.1
rubredoxin-NAD+ reductase.
  
  
 0.649
SDN74206.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase; Belongs to the sulfur carrier protein TusA family.
    
 0.540
SDN30299.1
Diguanylate cyclase (GGDEF) domain-containing protein.
       0.521
SDN30457.1
Helix-turn-helix domain-containing protein.
       0.512
SDN63952.1
ferredoxin--NADP+ reductase.
    
 
 0.506
pyrK
Dihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
    
 
 0.506
SDN89892.1
Hypothetical protein.
    
   0.487
SDM65779.1
Uncharacterised ACR, YkgG family COG1556.
    
   0.474
Your Current Organism:
Acetanaerobacterium elongatum
NCBI taxonomy Id: 258515
Other names: A. elongatum, AS 1.5012, Acetanaerobacterium elongatum Chen and Dong 2004, JCM 12359, strain Z7
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.