STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN36416.1Radical SAM family uncharacterized protein. (617 aa)    
Predicted Functional Partners:
SDN36373.1
Radical SAM-linked protein.
    0.995
SDN36482.1
Peptidase family M23.
  
    0.695
asnS
asparaginyl-tRNA synthetase.
       0.671
SDN36449.1
Stage IV sporulation protein FB.
       0.663
SDN40527.1
Hypothetical protein.
  
    0.590
SDN00991.1
4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.
   
 
 0.413
SDN36306.1
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain.
       0.410
Your Current Organism:
Acetanaerobacterium elongatum
NCBI taxonomy Id: 258515
Other names: A. elongatum, AS 1.5012, Acetanaerobacterium elongatum Chen and Dong 2004, JCM 12359, strain Z7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.