STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN53344.1Transcriptional regulator, TetR family. (202 aa)    
Predicted Functional Partners:
SDN74066.1
Transcriptional regulator, TetR family.
  
     0.624
SDN00065.1
Transcriptional regulator, TetR family.
  
     0.623
SDO05700.1
Transcriptional regulator, TetR family.
  
     0.612
SDN97512.1
Transcriptional regulator, TetR family.
  
     0.521
SDM52625.1
Transcriptional regulator, TetR family.
  
     0.501
SDN61219.1
Transcriptional regulator, TetR family.
  
     0.473
SDN66139.1
Transcriptional regulator, TetR family.
  
     0.449
SDN13661.1
Transcriptional regulator, TetR family.
  
     0.448
SDN53394.1
ABC-2 type transport system permease protein.
       0.438
SDN90363.1
Transcriptional regulator, TetR family.
  
     0.409
Your Current Organism:
Acetanaerobacterium elongatum
NCBI taxonomy Id: 258515
Other names: A. elongatum, AS 1.5012, Acetanaerobacterium elongatum Chen and Dong 2004, JCM 12359, strain Z7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.