STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN59071.1Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily. (374 aa)    
Predicted Functional Partners:
SDM78405.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.999
SDM78516.1
Cyclodextrin-binding protein.
 
 0.998
SDN61814.1
Multiple sugar transport system permease protein.
 
 0.998
SDM79903.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.997
SDM78449.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.995
SDM81579.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.995
SDN73067.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.995
SDM79863.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.990
SDN73026.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.984
SDM81543.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.983
Your Current Organism:
Acetanaerobacterium elongatum
NCBI taxonomy Id: 258515
Other names: A. elongatum, AS 1.5012, Acetanaerobacterium elongatum Chen and Dong 2004, JCM 12359, strain Z7
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