STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN78904.1Hypothetical protein. (130 aa)    
Predicted Functional Partners:
SDN78706.1
Phage head-tail joining protein.
 
     0.948
SDN78749.1
Phage protein, HK97 gp10 family.
 
     0.948
SDN78812.1
Hypothetical protein.
 
     0.948
SDN78862.1
Phage major tail protein, phi13 family.
 
    0.948
SDN05719.1
Phage major tail protein, phi13 family.
 
    0.785
SDN09031.1
Phage major tail protein, phi13 family.
 
    0.785
SDN05609.1
Head-tail adaptor.
 
     0.782
SDN05646.1
Phage protein, HK97 gp10 family.
 
     0.782
SDN05685.1
Hypothetical protein.
 
     0.782
SDN09055.1
Hypothetical protein.
 
     0.782
Your Current Organism:
Acetanaerobacterium elongatum
NCBI taxonomy Id: 258515
Other names: A. elongatum, AS 1.5012, Acetanaerobacterium elongatum Chen and Dong 2004, JCM 12359, strain Z7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.