STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN88428.1Glycosyl hydrolases family 2; Belongs to the glycosyl hydrolase 2 family. (569 aa)    
Predicted Functional Partners:
SDN88386.1
Major Facilitator Superfamily protein.
 
  
 0.963
SDN62619.1
Protein of unknown function.
 
     0.944
SDN88756.1
Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
   
    0.791
SDN50916.1
Alpha-galactosidase.
 
 
 0.758
SDN81080.1
Ribose 5-phosphate isomerase B.
  
  
 0.629
SDM78663.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
   
 
 0.613
SDM83505.1
3-oxoacyl-[acyl-carrier protein] reductase.
   
 
 0.613
SDN60208.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
   
 
 0.613
SDN82688.1
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.613
SDN91575.1
Dehydrogenase/reductase SDR family member 1.
   
 
 0.613
Your Current Organism:
Acetanaerobacterium elongatum
NCBI taxonomy Id: 258515
Other names: A. elongatum, AS 1.5012, Acetanaerobacterium elongatum Chen and Dong 2004, JCM 12359, strain Z7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.