STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO05193.1ABC-2 type transport system permease protein. (261 aa)    
Predicted Functional Partners:
SDO05283.1
ABC-2 type transport system ATP-binding protein.
 
  
 0.953
SDO05232.1
ABC-2 type transport system permease protein.
 
  
 0.952
SDN51650.1
ABC-2 type transport system ATP-binding protein.
 
  
 0.802
SDN97652.1
ABC-2 type transport system ATP-binding protein.
 
  
 0.802
SDM54777.1
ABC-2 type transport system ATP-binding protein.
 
  
 0.800
SDN51785.1
ABC-2 type transport system permease protein.
 
  
 0.797
SDN97688.1
ABC-2 type transport system permease protein.
 
  
 0.797
SDN51695.1
ABC-type uncharacterized transport system, permease component.
  
     0.767
SDO05320.1
MutS domain V; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
 
     0.746
SDM54697.1
ABC-2 type transport system permease protein.
 
  
 0.605
Your Current Organism:
Acetanaerobacterium elongatum
NCBI taxonomy Id: 258515
Other names: A. elongatum, AS 1.5012, Acetanaerobacterium elongatum Chen and Dong 2004, JCM 12359, strain Z7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.