STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO10815.1Hypothetical protein. (368 aa)    
Predicted Functional Partners:
SDM62393.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
  
 
 0.919
SDN25785.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
  0.905
SDM62426.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
    
 0.876
SDM55985.1
[FeFe] hydrogenase, group B1/B3.
    
 0.828
SDN76423.1
Iron only hydrogenase large subunit, C-terminal domain.
    
 0.817
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
    
  0.790
SDM98890.1
4Fe-4S binding domain-containing protein.
 
  
  0.470
SDN89892.1
Hypothetical protein.
 
    0.461
SDN74108.1
Hypothetical protein.
   
    0.435
SDN85731.1
Nicotinamidase-related amidase.
   
    0.435
Your Current Organism:
Acetanaerobacterium elongatum
NCBI taxonomy Id: 258515
Other names: A. elongatum, AS 1.5012, Acetanaerobacterium elongatum Chen and Dong 2004, JCM 12359, strain Z7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.