STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO05251.1Amidohydrolase. (420 aa)    
Predicted Functional Partners:
CDO06084.1
Amidohydrolase.
  
     0.774
CDO06119.1
Alpha/beta hydrolase.
 
     0.768
CDO11453.1
Rieske (2Fe-2S) domain-containing protein.
  
  
  0.766
CDO11451.1
SMP-30/gluconolaconase/LRE domain-containing protein.
 
    0.764
CDO06124.1
Lysophospholipase.
  
     0.763
CDO06205.1
Hypothetical protein.
  
     0.761
CDO06117.1
Amidohydrolase.
  
     0.755
CDO06112.1
Ferredoxin.
  
     0.744
CDO06116.1
TIM-barrel fold metal-dependent hydrolase.
 
     0.741
CDO09221.1
TetR family transcriptional regulator.
  
     0.741
Your Current Organism:
Mycolicibacterium cosmeticum
NCBI taxonomy Id: 258533
Other names: ATCC BAA-878, CIP 108170, DSM 44829, JCM 14739, M. cosmeticum, Mycobacterium cosmeticum, Mycobacterium cosmeticum Cooksey et al. 2004, Mycobacterium oesypum, Mycolicibacterium cosmeticum (Cooksey et al. 2004) Gupta et al. 2018, strain LTA-388
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.