STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO06565.1Transcriptional regulator. (246 aa)    
Predicted Functional Partners:
CDO06514.1
Urea amidolyase.
  
 
  0.875
CDO06935.1
IclR family transcriptional regulator.
  
     0.771
CDO10135.1
IclR-family protein transcriptional regulator.
  
     0.771
CDO07584.1
IclR-family protein transcriptional regulator.
  
     0.767
CDO10396.1
Glycerol operon regulatory protein.
  
     0.765
CDO10949.1
IclR family transcriptional regulator.
  
     0.765
CDO07496.1
IclR family transcriptional regulator.
  
     0.748
CDO07504.1
Regulatory proteins IclR.
  
     0.745
CDO07155.1
Acetate operon repressor.
  
     0.739
CDO05934.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
    
  0.663
Your Current Organism:
Mycolicibacterium cosmeticum
NCBI taxonomy Id: 258533
Other names: ATCC BAA-878, CIP 108170, DSM 44829, JCM 14739, M. cosmeticum, Mycobacterium cosmeticum, Mycobacterium cosmeticum Cooksey et al. 2004, Mycobacterium oesypum, Mycolicibacterium cosmeticum (Cooksey et al. 2004) Gupta et al. 2018, strain LTA-388
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