STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO07243.1GntR family transcriptional regulator. (233 aa)    
Predicted Functional Partners:
CDO10257.1
Transcriptional regulator.
  
     0.771
CDO05307.1
GntR family transcriptional regulator.
  
     0.769
CDO08527.1
GntR family transcriptional regulator.
  
     0.766
CDO09294.1
GntR family transcriptional regulator.
  
     0.760
CDO08039.1
GntR family transcriptional regulator.
  
     0.722
CDO05586.1
GntR family transcriptional regulator.
  
  
 0.688
CDO07241.1
Hydantoin racemase.
 
     0.669
CDO07242.1
Cytosine/purines uracil thiamine allantoin permease.
 
     0.646
CDO06751.1
GntR family transcriptional regulator.
  
  
 0.644
CDO07244.1
Monooxygenase.
       0.631
Your Current Organism:
Mycolicibacterium cosmeticum
NCBI taxonomy Id: 258533
Other names: ATCC BAA-878, CIP 108170, DSM 44829, JCM 14739, M. cosmeticum, Mycobacterium cosmeticum, Mycobacterium cosmeticum Cooksey et al. 2004, Mycobacterium oesypum, Mycolicibacterium cosmeticum (Cooksey et al. 2004) Gupta et al. 2018, strain LTA-388
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