STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO10197.13-oxoadipate enol-lactonase. (250 aa)    
Predicted Functional Partners:
pip
Proline iminopeptidase Pip.
  
  0.989
CDO10633.1
Carboxymuconolactone decarboxylase.
    
  0.942
CDO10198.1
succinyl-CoA:3-ketoacid-coenzyme A transferase 1.
  
 
 0.931
CDO10199.1
butyryl-CoA:acetate CoA transferase.
    
 0.928
CDO07347.1
Carboxymuconolactone decarboxylase.
 
  
  0.908
pcaB
3-carboxy-cis,cis-muconate cycloisomerase.
 
  
 0.854
CDO10196.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
  0.800
CDO08228.1
Mycocerosic acid synthase.
  
 0.798
CDO08583.1
Acyl transferase domain-containing protein.
  
 0.798
CDO11378.1
Beta-ketoacyl synthase.
  
 0.798
Your Current Organism:
Mycolicibacterium cosmeticum
NCBI taxonomy Id: 258533
Other names: ATCC BAA-878, CIP 108170, DSM 44829, JCM 14739, M. cosmeticum, Mycobacterium cosmeticum, Mycobacterium cosmeticum Cooksey et al. 2004, Mycobacterium oesypum, Mycolicibacterium cosmeticum (Cooksey et al. 2004) Gupta et al. 2018, strain LTA-388
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