STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO10252.1Bacteriocin biosynthesis cyclodehydratase domain protein. (280 aa)    
Predicted Functional Partners:
CDO09366.1
Sulfur carrier protein ThiS.
  
 0.993
CDO07207.1
ThiS family protein.
 
 0.957
CDO06265.1
ThiS family protein.
  
 0.950
CDO10574.1
Cysteine desulfurase.
   
 0.940
CDO07210.1
Molybdenum cofactor synthesis domain-containing protein.
  
 0.929
CDO09411.1
Peptidase S16, lon domain-containing protein.
    
 0.928
thiG
Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
 
 0.907
CDO07209.1
Molybdopterin converting factor, large subunit.
  
 0.897
thiC
Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.
  
  
 0.828
mpt64
Immunogenic protein MPT64.
  
 0.789
Your Current Organism:
Mycolicibacterium cosmeticum
NCBI taxonomy Id: 258533
Other names: ATCC BAA-878, CIP 108170, DSM 44829, JCM 14739, M. cosmeticum, Mycobacterium cosmeticum, Mycobacterium cosmeticum Cooksey et al. 2004, Mycobacterium oesypum, Mycolicibacterium cosmeticum (Cooksey et al. 2004) Gupta et al. 2018, strain LTA-388
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