STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO11449.1acyl-CoA synthetase. (533 aa)    
Predicted Functional Partners:
CDO11447.1
AMP-dependent synthetase and ligase.
 
  
 
0.923
CDO11451.1
SMP-30/gluconolaconase/LRE domain-containing protein.
 
 
   0.911
CDO11448.1
Oxidoreductase, short chain dehydrogenase/reductase.
 
 
   0.905
CDO08228.1
Mycocerosic acid synthase.
 
 0.899
CDO08583.1
Acyl transferase domain-containing protein.
 
 0.899
CDO11378.1
Beta-ketoacyl synthase.
 
 0.899
CDO11379.1
Tylactone synthase modules 4 & 5.
 
 0.899
CDO11450.1
GntR family transcriptional regulator.
 
     0.889
CDO07820.1
Polyketide synthase.
 
 0.867
CDO06071.1
3-oxoacyl-ACP reductase.
  
 
 0.853
Your Current Organism:
Mycolicibacterium cosmeticum
NCBI taxonomy Id: 258533
Other names: ATCC BAA-878, CIP 108170, DSM 44829, JCM 14739, M. cosmeticum, Mycobacterium cosmeticum, Mycobacterium cosmeticum Cooksey et al. 2004, Mycobacterium oesypum, Mycolicibacterium cosmeticum (Cooksey et al. 2004) Gupta et al. 2018, strain LTA-388
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