STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA0095Putative multidrug efflux membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (381 aa)    
Predicted Functional Partners:
RPA0096
Putative multidrug-efflux transport protein.
 
 0.974
RPA4095
Putative multidrug-efflux transport protein mexF.
 
 0.850
mexD2-2
RND multidrug efflux transporter MexD.
 
 0.847
mexF
Putative RND multidrug efflux transporter MexF; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 0.847
mexD2
RND multidrug efflux transporter MexD.
 
 0.845
mexB
RND multidrug efflux transporter MexB.
 
 0.845
mexD3
RND multidrug efflux transporter MexD; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 0.845
RPA2572
Possible outer membrane efflux protein.
 
 0.806
oprN
Putative outer membrane efflux protein OprN precursor.
 
 
 0.725
RPA2373
Possible outer membrane protein.
 
 0.716
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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