Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA0111DUF81. (262 aa)    
Predicted Functional Partners:
betB
Putative betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.774
sulP
Sulfate transporter family protein.
  
  
 0.764
RPA1698
DUF81.
  
     0.757
cysW
Possible sulfate ABC transporter, permease component.
  
  
 0.582
RPA0105
Transcriptional regulator, GntR family with aminotransferase domain.
 
  
 0.514
tauX
Taurine dehydrogenase small subunit; Bruggemann et al., Microbiology (2004), 150, 805-816.
       0.494
tauY
Taurine dehydrogenase large subunit; Bruggemann et al., Microbiology (2004), 150, 805-816.
       0.485
modB
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
     
 0.441
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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