Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tauYTaurine dehydrogenase large subunit; Bruggemann et al., Microbiology (2004), 150, 805-816. (464 aa)    
Predicted Functional Partners:
tauX
Taurine dehydrogenase small subunit; Bruggemann et al., Microbiology (2004), 150, 805-816.
 
 
  0.994
ggt1
Gamma-glutamyltranspeptidase.
  
 
 0.913
RPA0776
Possible gamma-glutamyltranspeptidase precursor; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 
 0.913
ggt2
Possible gamma-glutamyltranspeptidase.
  
 
 0.913
ggt3
Putative gamma-glutamyltranspeptidase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 
 0.913
RPA1464
Possible glutamine amidotransferase.
 
  
 0.593
goaT
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.561
betB
Putative betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.557
RPA0111
DUF81.
       0.485
gcvT2
Glycine cleavage system protein T2; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 
 0.467
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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