Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA0126Possible sugar binding protein of ABC transporter. (426 aa)    
Predicted Functional Partners:
RPA0127
Putative permease protein of sugar ABC transporter.
 
 
 0.972
RPA0128
Possible permease protein of sugar ABC transporter.
 
 
 0.971
RPA0129
Putative sugar binding protein of ABC transporter; Belongs to the ABC transporter superfamily.
 
 
 0.932
ugpE
Sn-glycerol 3-phosphate transport system, integral membrane protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 
 0.879
ugpA
Sn-glycerol-3-phosphate transport system permease protein.
 
 
 0.874
cpdA-3
Possible 3',5'-cyclic-nucleotide phosphodiesterase, cpdA; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
 
     0.865
cpdA-2
Possible 3',5'-cyclic-nucleotide phosphodiesterase, cpdA; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
 
     0.844
RPA1396
Possible multiple sugar transport system permease protein.
 
 
 0.841
RPA3469
Probable permease protein of sugar ABC transporter.
 
 
 0.841
RPA3468
Putative permease protein of sugar ABC transporter.
 
 
 0.828
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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