Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
RPA0127Putative permease protein of sugar ABC transporter. (278 aa)    
Predicted Functional Partners:
RPA0128
Possible permease protein of sugar ABC transporter.
 
 0.987
RPA0129
Putative sugar binding protein of ABC transporter; Belongs to the ABC transporter superfamily.
 
 
 0.980
RPA0126
Possible sugar binding protein of ABC transporter.
 
 
 0.972
RPA3469
Probable permease protein of sugar ABC transporter.
 
 0.942
ugpA
Sn-glycerol-3-phosphate transport system permease protein.
 
 0.932
RPA1396
Possible multiple sugar transport system permease protein.
 
 0.924
RPA3471
ABC transporter, ATP-binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the ABC transporter superfamily.
 
 
 0.903
ugpC
ATP-binding component of sn-glycerol 3-phosphate transport system; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
 
 0.902
RPA1399
Putative transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.895
RPA1398
Putative sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.892
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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