STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA0132ABC sulfonate transport system, permease protein. (257 aa)    
Predicted Functional Partners:
RPA0133
ABC sulfate transport system, periplasmic binding protein.
 
  
 0.968
RPA0131
ABC sulfate transport system, ATP-binding protein.
 
  
 0.883
hydC
Hydrogenase gamma-fused hydrogenase large and small subunit.
 
  
 0.873
RPA0135
Possible oxidoreductase.
 
    0.837
RPA2677
Putative substrate-binding protein, subunit of ABC transporter.
 
  
 0.694
RPA2678
Putative permease protein, subunit of ABC transporter.
 
    0.683
RPA2608
Possible sulfonate binding protein.
 
  
 0.651
RPA3383
Possible taurine transport system permease protein.
 
    0.642
RPA2613
Putative aliphatic sulfonate binding protein, subunit of ABC transporter.
 
  
 0.626
RPA4164
Possible aliphatic sulfonate binding protein of ABC transporter system.
 
  
 0.618
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.