Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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RPA0145Metal dependent phosphohydrolase with a response regulator receiver domain; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (388 aa)    
Predicted Functional Partners:
RPA0767
Putative diguanylate cyclase (GGDEF) with PAS/PAC domain.
 
 0.977
RPA3994
Putative diguanylate cyclase (GGDEF).
  
 0.972
RPA2476
Putative diguanylate cyclase (GGDEF).
  
 0.971
RPA3792
Putative diguanylate cyclase (GGDEF).
  
 0.969
RPA2984
Putative diguanylate cyclase (GGDEF).
  
 0.966
RPA4790
Response regulator receiver:histidine kinase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
   
 0.961
RPA2769
Putative diguanylate cyclase (GGDEF).
  
 0.960
RPA3076
Putative diguanylate cyclase (GGDEF).
  
 0.960
RPA3832
Putative diguanylate cyclase (GGDEF) with PAS/PAC domain.
 
 0.944
RPA3132
Putative diguanylate cyclase (GGDEF) with response regulator receiver domain.
 
  
0.932
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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