STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA0148Conserved hypothetical protein. (178 aa)    
Predicted Functional Partners:
RPA4601
Conserved hypothetical protein.
  
     0.775
RPA0152
Protein of unknown function, UPF0066.
 
    0.742
RPA0149
Possible ABC-type iron-siderophore transport system ATP-binding protein.
  
    0.717
RPA0150
Putative ABC transporter, iron, hemin permease homolog; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
    0.717
RPA0151
Possible iron ABC transporter periplasmic binding protein.
  
    0.715
RPA0147
Transcriptional regulator, ModE family.
  
    0.564
nnrU
Putative NnrU protein.
  
    0.564
RPA0713
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
    0.536
RPA0133
ABC sulfate transport system, periplasmic binding protein.
  
    0.405
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.