STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA0149Possible ABC-type iron-siderophore transport system ATP-binding protein. (264 aa)    
Predicted Functional Partners:
RPA0150
Putative ABC transporter, iron, hemin permease homolog; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.986
RPA0151
Possible iron ABC transporter periplasmic binding protein.
 
 
 0.981
RPA2309
Putative iron chelatin ABC transporter, permease subunit; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.936
RPA2308
Possible periplasmic iron siderophore binding protein of ABC transporter.
 
 0.931
RPA2119
Putative permease protein of ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.913
RPA0723
Possible hemin ABC transporter, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.906
RPA0152
Protein of unknown function, UPF0066.
  
    0.814
RPA0148
Conserved hypothetical protein.
       0.714
RPA2384
Putative ironIII transport permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.684
RPA0720
Putative ABC-type cobalamin/Fe3+-siderophores transport systems, periplasmic components; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 
 0.662
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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