STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA0150Putative ABC transporter, iron, hemin permease homolog; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (340 aa)    
Predicted Functional Partners:
RPA0149
Possible ABC-type iron-siderophore transport system ATP-binding protein.
 
 0.989
RPA0151
Possible iron ABC transporter periplasmic binding protein.
 
 
 0.983
RPA2120
Putative hemin binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
 0.952
fecE
Putative iron(III) dicitrate ABC transporter, ATP-binding component FecE; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 0.948
RPA2310
Putative iron ABC transporter ATP-binding protein.
 
 0.946
hmuV
Putative ATP-binding protein of ABC transporter; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 0.943
RPA2308
Possible periplasmic iron siderophore binding protein of ABC transporter.
 
 
 0.934
RPA0152
Protein of unknown function, UPF0066.
  
    0.816
RPA2081
Possible Fe ABC Transporter.
 
 
 0.773
RPA0720
Putative ABC-type cobalamin/Fe3+-siderophores transport systems, periplasmic components; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
 0.752
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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