STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA0215Possible general stress protein 26; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (162 aa)    
Predicted Functional Partners:
RPA0214
Hypothetical protein; InterPro IPR000694.
  
    0.843
RPA4217
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the UPF0337 (CsbD) family.
  
    0.804
RPA4418
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the UPF0337 (CsbD) family.
  
    0.796
RPA2823
Conserved hypothetical protein; COGs COG2388.
   
  
 0.740
RPA2123
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
  
 0.674
phyB3
Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB3; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
    0.641
phyB2
Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB2.
  
    0.632
phyB1
Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB1.
  
     0.610
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
 
    0.566
RPA2073
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 0.540
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.