Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RPA0316Conserved hypothetical protein; COGs COG3176. (316 aa)    
Predicted Functional Partners:
RPA4334
Possible acyltransferase.
  
 0.954
RPA0317
Sensor histidine kinase with a response regulator receiver domain.
       0.667
RPA3969
Metallo-phosphoesterase.
 
    0.604
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.535
RPA2739
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
     0.501
RPA4369
Transcriptional regulator, MarR family.
  
     0.500
RPA0443
Possible transcriptional regulator, XRE family; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
     0.454
RPA3432
Conserved hypothetical protein.
  
     0.443
RPA0318
Putative Mg(2+) chelatase family protein.
       0.417
pssA
Possible phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
   
 0.409
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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