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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
mepAPutative penicillin-insensitive murein endopeptidase A. (320 aa)    
Predicted Functional Partners:
matE2
Putative multidrug efflux protein (NorM); Multidrug efflux pump; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
      
 0.790
emrA
Putative multidrug resistance protein.
   
  
 0.747
RPA4189
Conserved hypothetical protein; InterPro IPR001687 COGs COG3108.
  
     0.733
mexA
Putative RND multidrug efflux membrane fusion protein MexA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  
 0.665
RPA1583
Conserved hypothetical protein; InterPro IPR006507.
  
     0.663
RPA0026
Major Facilitator Superfamily (MFS) transporter.
      0.654
RPA1584
Conserved hypothetical protein; InterPro IPR001687 COGs COG3106.
  
     0.653
mexB
RND multidrug efflux transporter MexB.
      
 0.609
RPA4380
Ribonuclease T2; Belongs to the RNase T2 family.
  
     0.506
RPA4739
Conserved hypothetical protein.
 
     0.497
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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