rpsO protein (Rhodopseudomonas palustris CGA009)

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rpsO

Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. Belongs to the universal ribosomal protein uS15 family. (89 aa)

Predicted Functional Partners:

rpsI,

0.998

rpsB

0.998

rpsQ

0.998

RPS18

0.997

rplM,

0.996

RPS6

0.996

rpsH

0.996

rpsC

0.996

rpmA,

0.995

rplQ

0.995

Your Current Organism:

Rhodopseudomonas palustris CGA009

NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPS18	RPS6	RPA3078	RPA3077	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.	Possible 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. Belongs to the bacterial ribosomal protein bS6 family.	0.999
RPS18	rplM,	RPA3078	RPA2767	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.995
RPS18	rplQ	RPA3078	RPA3225	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.	50S ribosomal protein L17; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.990
RPS18	rpmA,	RPA3078	RPA0159	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.	Ribosomal protein L27; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the bacterial ribosomal protein bL27 family.	0.992
RPS18	rpsB	RPA3078	RPA2922	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.	30S ribosomal protein S2; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the universal ribosomal protein uS2 family.	0.997
RPS18	rpsC	RPA3078	RPA3244	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.996
RPS18	rpsH	RPA3078	RPA3236	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.	30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.	0.996
RPS18	rpsI,	RPA3078	RPA2768	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.	Ribosomal protein S9; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.996
RPS18	rpsO	RPA3078	RPA0433	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.	Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. Belongs to the universal ribosomal protein uS15 family.	0.997
RPS18	rpsQ	RPA3078	RPA3241	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.997
RPS6	RPS18	RPA3077	RPA3078	Possible 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. Belongs to the bacterial ribosomal protein bS6 family.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.	0.999
RPS6	rplM,	RPA3077	RPA2767	Possible 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. Belongs to the bacterial ribosomal protein bS6 family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.990
RPS6	rplQ	RPA3077	RPA3225	Possible 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. Belongs to the bacterial ribosomal protein bS6 family.	50S ribosomal protein L17; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.991
RPS6	rpmA,	RPA3077	RPA0159	Possible 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. Belongs to the bacterial ribosomal protein bS6 family.	Ribosomal protein L27; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the bacterial ribosomal protein bL27 family.	0.989
RPS6	rpsB	RPA3077	RPA2922	Possible 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. Belongs to the bacterial ribosomal protein bS6 family.	30S ribosomal protein S2; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the universal ribosomal protein uS2 family.	0.998
RPS6	rpsC	RPA3077	RPA3244	Possible 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. Belongs to the bacterial ribosomal protein bS6 family.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.996
RPS6	rpsH	RPA3077	RPA3236	Possible 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. Belongs to the bacterial ribosomal protein bS6 family.	30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.	0.990
RPS6	rpsI,	RPA3077	RPA2768	Possible 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. Belongs to the bacterial ribosomal protein bS6 family.	Ribosomal protein S9; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.997
RPS6	rpsO	RPA3077	RPA0433	Possible 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. Belongs to the bacterial ribosomal protein bS6 family.	Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. Belongs to the universal ribosomal protein uS15 family.	0.996
RPS6	rpsQ	RPA3077	RPA3241	Possible 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. Belongs to the bacterial ribosomal protein bS6 family.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.995

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