STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AtsCPutative sulfate ester transporter; ATP-binding component. (276 aa)    
Predicted Functional Partners:
RPA0468
Putative ATP-binding protein of ABC transporter.
  
 0.991
RPA0470
Perplasmic binding protein of ABC transporter.
 
  
 0.959
RPA0467
Putative glycerate dehydrogenase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.883
RPA0466
Conserved hypothetical protein.
       0.856
RPA4162
Putative taurine ABC transport system permease protein.
  
 0.828
RPA2498
Possible ABC transporter, permease protein.
  
 0.806
RPA3383
Possible taurine transport system permease protein.
  
 0.806
RPA2678
Putative permease protein, subunit of ABC transporter.
  
 0.805
RPA3707
Possible nitrate transporter component, nrtA.
  
 0.790
RPA1363
Sulfate ester transport system permease protein.
 
  
 0.774
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.