Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA0495Conserved hypothetical protein; InterPro IPR000104:IPR001687:IPR006311. (382 aa)    
Predicted Functional Partners:
cobT2
cobT protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
       0.810
cobS2
cobS protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
       0.773
RPA0497
GCN5-related N-acetyltransferase.
       0.716
RPA0812
Putative transmembrane protein.
  
     0.666
RPA0454
Conserved hypothetical protein; COGs COG0532.
  
     0.623
RPA4205
Possible polysaccharide export protein, PST family.
  
     0.587
RPA4581
Conserved hypothetical protein.
  
     0.576
RPA0527
Conserved hypothetical protein.
  
     0.567
RPA0492
Conserved hypothetical protein.
 
     0.543
RPA1508
Conserved hypothetical protein.
  
    0.540
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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