Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA0515Possible efflux pump protein FarA. (389 aa)    
Predicted Functional Partners:
FarB
Putative efflux pump protein FarB; Belongs to the major facilitator superfamily.
 
 
 0.967
rmrB
Putative multidrug efflux pump, Major Facilitator Superfamily (MFS); Citation: Gonzalez-Pasayo and Martinez-Romero (2000) Mol. Plant Microbe Interact. 13:572-577; Belongs to the major facilitator superfamily.
 
 
 0.868
emrB1
Putative multidrug resistance protein B (drug efflux transporter); Belongs to the major facilitator superfamily.
 
 0.865
emrB2
Putative drug efflux pump, Major Facilitator Superfamily (MFS).
 
 
 0.859
RPA0516
Transcriptional regulator, MarR family.
 
   
 0.852
RPA0788
Possible Major Facilitator Superfamily (MFS) efflux pump.
 
 
 0.660
RPA2581
Putative outer membrane protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
 0.653
RPA2572
Possible outer membrane efflux protein.
 
 
 0.642
RPA1925
Putative transmembrane protein.
 
 
 0.640
oprN
Putative outer membrane efflux protein OprN precursor.
 
 
 0.625
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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