Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA0547Conserved hypothetical protein; InterPro IPR000379 COGs COG0400. (358 aa)    
Predicted Functional Partners:
fkbM
Possible methyltransferase, FkbM family.
 
     0.703
RPA1780
Phenylacetic acid degradation-related protein.
 
     0.702
RPA4432
NHL repeat; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
     0.630
RPA1704
Probable transcriptional regulator, TetR family.
  
     0.604
RPA4824
Conserved hypothetical protein.
  
     0.574
RPA3873
Hypothetical protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
  
     0.573
RPA1114
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
     0.570
RPA1032
Glycosyl transferase, family 2.
  
   
 0.547
RPA0481
Putative acyl-CoA dehydrogenase.
  
   
 0.517
RPA0548
Protein of unknown function UPF0118.
       0.505
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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