STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA0551Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (293 aa)    
Predicted Functional Partners:
RPA4151
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.756
RPA1721
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.717
RPA4283
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.703
RPA1562
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.655
dctA1
Dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
  
 0.569
RPA2642
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
    0.564
RPA1078
Probable transcriptional regulator, AraC family.
  
  
 0.550
RPA2110
Probable transcriptional regulator, AraC family.
  
  
 0.500
RPA1326
Probable transcriptional regulator, AraC family.
  
  
 0.486
RPA0553
Conserved hypothetical protein; COGs COG3257.
       0.463
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.