STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA0568Probable hydrolase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (221 aa)    
Predicted Functional Partners:
gloB
Putative glyoxalase II; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
  
  
0.915
RPA2523
Putative lactoylglutathione lyase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 
 0.913
RPA1377
Possible glyoxalase.
    
 0.912
RPA3503
Putative D-lactate dehydrogenase, oxidoreductase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 
 0.908
RPA4189
Conserved hypothetical protein; InterPro IPR001687 COGs COG3108.
 
    0.748
RPA0569
Conserved hypothetical protein; InterPro IPR002035.
  
    0.558
RPA0570
Conserved hypothetical protein.
       0.448
RPA2022
Specialized acyl carrier protein.
 
 
 0.441
RPA0567
Probable transcriptional regulator, AraC family.
  
    0.421
RPA3446
3-hydroxyisobutyrate dehydrogenase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the HIBADH-related family.
  
    0.409
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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