STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA0574Possible ABC transporter. (276 aa)    
Predicted Functional Partners:
RPA0573
Putative ABC transporter (ATP-binding protein); Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
  
 0.983
RPA0682
Possible ABC transporter ATP-binding component, membrane bound.
  
 
 0.623
RPA4087
ABC-2 type transport system permease and double ATP-binding protein fusion.
  
 
 0.622
regS
Two component sensor histidine kinase, RegS.
  
    0.606
RPA0575
Putative intracellular PHB depolymerase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
       0.581
RPA3981
Conserved hypothetical protein; InterPro IPR005242 COGs COG0392.
  
    0.495
RPA3026
Similar to abortive infection protein.
  
  
 0.484
regR
Two-component transcriptional regulator RegR, Fis family; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
    0.470
aro
Chorismate mutase.
  
    0.463
RPA3508
ATP-binding component of ABC transporter.
  
  
 0.447
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.