rpmH, protein (Rhodopseudomonas palustris CGA009)

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Score

rpmH,

Possible ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. (44 aa)

Predicted Functional Partners:

rplU,

0.988

rpmB,

0.988

rpsT

0.987

rnpA

0.985

rpsN

0.985

rpsU,-2

0.984

rplM,

0.983

rpsL

0.982

rpmI

0.981

rpmJ,

0.981

Your Current Organism:

Rhodopseudomonas palustris CGA009

NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rnpA	rplM,	RPA0633	RPA2767	Probable ribonuclease p protein component (protein c5); RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.849
rnpA	rplU,	RPA0633	RPA0158	Probable ribonuclease p protein component (protein c5); RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	Putative ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20.	0.859
rnpA	rpmB,	RPA0633	RPA0493	Probable ribonuclease p protein component (protein c5); RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	50S ribosomal protein L28; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.878
rnpA	rpmH,	RPA0633	RPA0634	Probable ribonuclease p protein component (protein c5); RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	Possible ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.985
rnpA	rpmI	RPA0633	RPA0039	Probable ribonuclease p protein component (protein c5); RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	50S ribosomal protein L35; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.515
rnpA	rpmJ,	RPA0633	RPA4197	Probable ribonuclease p protein component (protein c5); RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	50S ribosomal protein L36; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.605
rnpA	rpsL	RPA0633	RPA3255	Probable ribonuclease p protein component (protein c5); RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.880
rnpA	rpsN	RPA0633	RPA3237	Probable ribonuclease p protein component (protein c5); RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.516
rnpA	rpsT	RPA0633	RPA4836	Probable ribonuclease p protein component (protein c5); RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA; Belongs to the bacterial ribosomal protein bS20 family.	0.881
rnpA	rpsU,-2	RPA0633	RPA4176	Probable ribonuclease p protein component (protein c5); RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	Ribosomal protein S21; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.908
rplM,	rnpA	RPA2767	RPA0633	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Probable ribonuclease p protein component (protein c5); RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	0.849
rplM,	rplU,	RPA2767	RPA0158	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Putative ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20.	0.993
rplM,	rpmB,	RPA2767	RPA0493	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L28; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.990
rplM,	rpmH,	RPA2767	RPA0634	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Possible ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.983
rplM,	rpmI	RPA2767	RPA0039	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L35; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.992
rplM,	rpmJ,	RPA2767	RPA4197	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L36; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.989
rplM,	rpsL	RPA2767	RPA3255	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.994
rplM,	rpsN	RPA2767	RPA3237	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.992
rplM,	rpsT	RPA2767	RPA4836	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA; Belongs to the bacterial ribosomal protein bS20 family.	0.991
rplM,	rpsU,-2	RPA2767	RPA4176	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S21; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.987