Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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[Homology]
Score
RPA0679Protein of unknown function UPF0004:Elongator protein 3/MiaB/NifB. (677 aa)    
Predicted Functional Partners:
bchJ
Putative 4-vinyl protochlorophyllide reductase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
  
 0.695
RPA0680
Possible transcriptional regulator, TetR family.
       0.581
bchF
Possible 2-vinyl bacteriochlorophillide hydratase BchF subunit (AB034704).
  
  
 0.425
bchN
Protochlorophyllide reductase subunit BchN; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.
  
  
 0.410
RPA0681
Membrane permeases, predicted cation efflux pump; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
       0.409
RPA0682
Possible ABC transporter ATP-binding component, membrane bound.
       0.409
RPA0683
Possible ABC transporter permease component.
       0.409
RPA4569
DUF344; Uses inorganic polyphosphate (polyP) as a donor to convert ADP to ATP; Belongs to the polyphosphate kinase 2 (PPK2) family. Class I subfamily.
   
    0.407
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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