close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA0683Possible ABC transporter permease component. (377 aa)    
Predicted Functional Partners:
RPA0681
Membrane permeases, predicted cation efflux pump; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
  
 0.961
RPA0682
Possible ABC transporter ATP-binding component, membrane bound.
 
 
0.943
RPA4088
Probable membrane fusion protein (HlyD family of secretion proteins) linked to ABC efflux pumps.
  
 0.852
RPA4087
ABC-2 type transport system permease and double ATP-binding protein fusion.
 
 
0.753
RPA3789
Putative ATP-binding component of a transport system.
  
 0.728
RPA3790
Putative efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.604
RPA3788
Putative ABC transporter, ATP-binding protein.
 
 
 
0.565
RPA0680
Possible transcriptional regulator, TetR family.
       0.538
RPA0573
Putative ABC transporter (ATP-binding protein); Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 0.533
RPA3026
Similar to abortive infection protein.
  
  
 0.485
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.