Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
phnNATP-binding component, PhnN protein, possible kinase; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP). (194 aa)    
Predicted Functional Partners:
phnM1
Possible phosphonate utilization (C-P lyase) component; E. coli PhnM, HisM-like integral membrane protein.
  
 0.989
phnG
PhnG protein, phosphonate metabolism, function unknown.
 
  
 0.984
phnJ
PhnJ protein, phosphonate metabolism, function unknown; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
  
 0.983
phnK
Phosphonate ABC transporter, ATP-binding component,PhnK protein.
 
  
 0.979
phnH
Putative PhnH protein, phosphonate metabolism, function unknown.
 
  
 0.978
phnI
PhnI protein, phosphonate metabolism, function unknown.
 
  
 0.975
phnL
Phosphonate ABC transporter, ATP-binding component, PhnL protein.
 
  
 0.974
RPA0696
Possible transcriptional regulator, GntR family.
 
  
 0.924
RPA4147
Putative nucleoside phosphorylase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
      0.900
prsA
Putative ribose-phosphate pyrophosphokinase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the ribose-phosphate pyrophosphokinase family.
     
  0.900
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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