Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
phnJPhnJ protein, phosphonate metabolism, function unknown; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family. (292 aa)    
Predicted Functional Partners:
phnK
Phosphonate ABC transporter, ATP-binding component,PhnK protein.
 
 0.999
phnI
PhnI protein, phosphonate metabolism, function unknown.
 
 0.999
phnH
Putative PhnH protein, phosphonate metabolism, function unknown.
 
 
 0.999
phnG
PhnG protein, phosphonate metabolism, function unknown.
 
 
 0.999
phnM1
Possible phosphonate utilization (C-P lyase) component; E. coli PhnM, HisM-like integral membrane protein.
 
 
 0.997
phnL
Phosphonate ABC transporter, ATP-binding component, PhnL protein.
 
  
 0.997
phnM2
Possible phosphonate ABC transporter, permease component; E. coli PhnM, HisM-like integral membrane protein.
 
 
 0.992
RPA0696
Possible transcriptional regulator, GntR family.
 
  
 0.989
phnN
ATP-binding component, PhnN protein, possible kinase; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).
 
  
 0.983
phnD
Putative PhnD protein, phosphonate ABC transporter, periplasmic binding protein precursor.
 
  
 0.962
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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