Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phnE2Possible PhnE protein, phosphonate ABC transporter, permease component. (293 aa)    
Predicted Functional Partners:
phnD
Putative PhnD protein, phosphonate ABC transporter, periplasmic binding protein precursor.
 
 0.997
phnC
PhnC protein, phosphonate ABC transporter, ATP-binding component; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 0.990
phnE1
Putative PhnE protein, phosphonate ABC transporter, permease component.
 
  
 
0.988
RPA1385
Putative vanadium/vanadate transport system substrate-binding protein; Conserved in vnf operon of Azotobacter vinelandii.
 
 
 0.964
phnC2
Putative ATP-binding component of ABC vanadium/ vanadate transporter; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 
 0.947
RPA1384
Putative vanadium/vanadate permease component of ATP-dependent vanadium/vanadate uptake system; Conserved in vnf operon of Azotobacter vinelandii.
 
  
 
0.930
phnH
Putative PhnH protein, phosphonate metabolism, function unknown.
 
  
 0.599
phnI
PhnI protein, phosphonate metabolism, function unknown.
 
  
 0.590
phnM2
Possible phosphonate ABC transporter, permease component; E. coli PhnM, HisM-like integral membrane protein.
 
  
 0.573
phnK
Phosphonate ABC transporter, ATP-binding component,PhnK protein.
 
  
 0.556
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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