STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnM2Possible phosphonate ABC transporter, permease component; E. coli PhnM, HisM-like integral membrane protein. (397 aa)    
Predicted Functional Partners:
phnL
Phosphonate ABC transporter, ATP-binding component, PhnL protein.
 
 
 0.994
phnI
PhnI protein, phosphonate metabolism, function unknown.
 
 
 0.990
phnH
Putative PhnH protein, phosphonate metabolism, function unknown.
 
 
 0.990
phnG
PhnG protein, phosphonate metabolism, function unknown.
 
 
 0.990
phnJ
PhnJ protein, phosphonate metabolism, function unknown; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
 
 0.989
RPA0703
Conserved hypothetical protein.
 
    0.959
RPA0701
Putative acetyltransferase (virginiamycin, streptogramin A, chloramphenicol).
 
    0.951
phnM1
Possible phosphonate utilization (C-P lyase) component; E. coli PhnM, HisM-like integral membrane protein.
  
 
 
0.924
phnK
Phosphonate ABC transporter, ATP-binding component,PhnK protein.
 
  
 0.918
RPA0696
Possible transcriptional regulator, GntR family.
 
  
 0.883
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.