Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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RPA0720Putative ABC-type cobalamin/Fe3+-siderophores transport systems, periplasmic components; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (270 aa)    
Predicted Functional Partners:
fecE
Putative iron(III) dicitrate ABC transporter, ATP-binding component FecE; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
 0.933
RPA0723
Possible hemin ABC transporter, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.907
cobD,
Putative cobalamin biosynthetic protein cobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
     
 0.825
hmuV
Putative ATP-binding protein of ABC transporter; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 
 0.705
RPA0149
Possible ABC-type iron-siderophore transport system ATP-binding protein.
  
 
 0.662
RPA2310
Putative iron ABC transporter ATP-binding protein.
  
 
 0.662
RPA0150
Putative ABC transporter, iron, hemin permease homolog; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.624
RPA2119
Putative permease protein of ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.618
RPA2309
Putative iron chelatin ABC transporter, permease subunit; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.608
cobC
Putative cobalamin biosynthetic protein CobC.
       0.604
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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