STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
RPA0723Possible hemin ABC transporter, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (341 aa)    
Predicted Functional Partners:
fecE
Putative iron(III) dicitrate ABC transporter, ATP-binding component FecE; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 0.993
RPA2120
Putative hemin binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
 0.955
RPA0720
Putative ABC-type cobalamin/Fe3+-siderophores transport systems, periplasmic components; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
 0.952
hmuV
Putative ATP-binding protein of ABC transporter; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 0.939
RPA0149
Possible ABC-type iron-siderophore transport system ATP-binding protein.
 
 0.923
RPA2081
Possible Fe ABC Transporter.
 
 
 0.915
RPA2308
Possible periplasmic iron siderophore binding protein of ABC transporter.
 
 
 0.914
RPA2310
Putative iron ABC transporter ATP-binding protein.
 
 0.874
RPA0151
Possible iron ABC transporter periplasmic binding protein.
 
 
 0.833
nxiA,
Putative high-affinity nickel-transport protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
  
  
 0.823
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.