Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA0746Possible deca-heme c-type cytochrome; Shewanella putrefaciens homolog is involved in metal reduction. Homology is only in C-terminal 60% of predicted protein. (534 aa)    
Predicted Functional Partners:
RPA2346
Hypothetical protein; InterPro IPR006311.
 
   
 0.740
RPA4816
Two component sensor histidine kinase.
  
 
 
 0.730
RPA3571
Two component sensor histidine kinase.
    
 
 0.675
RPA0745
Possible outer membrane protein precursor.
  
 
 0.665
RPA0380
Possible oxidoreductase similar to formate dehydrogenase and cbbBc of R. eutropha; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.625
RPA4231
Putative oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.625
bisC
Biotin sulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.625
RPA1972
Sensor histidine kinase.
    
 
 0.604
RPA3101
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
     0.600
RPA4417
Sensor histidine kinase with PAS/PAC and response regulator receiver domains.
   
 
 0.597
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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