Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA0760Putative oligopeptide ABC transporter, permease component. (317 aa)    
Predicted Functional Partners:
RPA0759
Putative oligopeptide ABC transporter, permease component.
 
 0.978
RPA0755
Putative oligopeptide ABC transporter, ATP-binding component; Belongs to the ABC transporter superfamily.
 
 
 0.974
RPA0758
Putative oligopeptide ABC transporter, ATP-binding component; Belongs to the ABC transporter superfamily.
 
 
 0.970
RPA0761
Possible oligopeptide ABC transporter, periplasmic binding protein component; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
 0.936
RPA0762
Possible oligopeptide ABC transporter, periplasmic binding protein component.
 
 
 0.920
RPA1448
Putative oligopeptide ABC transporter (permease).
 
 0.919
RPA1446
Possible dipeptide ABC transporter (dipeptide-binding protein); Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 0.916
oppC
Putative ABC transporter permease protein.
 
 0.911
RPA1471
Putative dipeptide ABC transporter (permease).
 
 0.910
RPA2329
Putative ABC transporter permease protein.
 
 0.909
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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