Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA0765Putative outer membrane receptor for iron transport. (787 aa)    
Predicted Functional Partners:
RPA0764
Conserved hypothetical protein; InterPro IPR002048.
       0.723
RPA1345
Conserved hypothetical protein.
 
 
 0.583
RPA1340
Probable FecR, iron siderophore sensor protein.
 
  
 0.575
RPA1335
Probable FecR, iron siderophore sensor protein.
 
  
 0.573
RPA1338
Conserved hypothetical protein.
 
 
 0.549
RPA1353
Conserved hypothetical protein; InterPro IPR000694.
 
 
 0.548
RPA1333
Conserved hypothetical protein; InterPro IPR001687.
 
 
 0.527
fecR3
Probable FecR, iron siderophore sensor protein.
 
  
 0.523
RPA3281
Probable FecR, iron siderophore sensor protein.
 
  
 0.522
fecR4
Probable FecR, iron siderophore sensor protein.
 
  
 0.502
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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